3.1.1.2.1.12. etfl.core.rna

ME-related Enzyme subclasses and methods definition

3.1.1.2.1.12.1. Module Contents

3.1.1.2.1.12.1.1. Classes

RNA

Helper class that provides a standard way to create an ABC using

mRNA

Helper class that provides a standard way to create an ABC using

rRNA

tRNA

Helper class that provides a standard way to create an ABC using
class ETFL.RNA(id=None, kdeg=None, gene_id=None, *args, **kwargs)

Bases: etfl.core.macromolecule.Macromolecule

Helper class that provides a standard way to create an ABC using inheritance.

property rna(self)
property gene(self)
init_variable(self, queue=False)

Attach an mRNAVariable object to the Species. Needs to have the object attached to a model

Returns

property molecular_weight(self)

Necessary for scaling Use Biopython for this

Returns

class ETFL.mRNA(id=None, kdeg=None, gene_id=None, *args, **kwargs)

Bases: RNA

Helper class that provides a standard way to create an ABC using inheritance.

property peptide(self)
class ETFL.rRNA(id=None, ribosomes=[], **kwargs)

Bases: cobra.Metabolite

property ribosomes(self)
static from_metabolite(met)
class ETFL.tRNA(aminoacid_id, charged, *args, **kwargs)

Bases: etfl.core.macromolecule.Macromolecule

Helper class that provides a standard way to create an ABC using inheritance.

init_variable(self, queue=False)

Attach a tRNAVariable object to the Species. Needs to have the object attached to a model

Returns

property aminoacid(self)
property molecular_weight(self)

Necessary for scaling Use Biopython for this

Returns