3.1.1.3.1.2. etfl.data.ecoli_utils

3.1.1.3.1.2.1. Module Contents

3.1.1.3.1.2.1.1. Functions

infer_enzyme_from_gpr(reaction, default_kcat, default_kdeg)
compositions_from_gpr(reaction)	Warning: Use this function only if you have no information on the enzymes.

etfl.data.ecoli_utils.infer_enzyme_from_gpr(reaction, default_kcat, default_kdeg)

etfl.data.ecoli_utils.compositions_from_gpr(reaction)

Warning: Use this function only if you have no information on the enzymes. Logically parses the GPR to automatically find isozymes ( logical OR ) and subunits ( logical AND ), and creates the necessary complexation reactions: 1 per isozyme, requiring the peptides of each subunit

Parameters

reaction (cobra.Reaction) –

Returns